Web Resources
SKIN Genes – single-cell RNA-seq visualization tool for skin biology-related datasets.
CellChat – a versatile tool for the inference and analysis of cell-cell communication.
UCI Centers
Lectures
Plenary lecture, Society for Investigative Dermatology 2019 annual meeting
Community lecture, UCI Stem Cell Center 2019
Datasets
List of published bulk and single-cell RNA-sequencing datasets, including collaborative projects.
- Time course profiling of mouse wound myofibroblasts by bulk RNA-sequencing. GEO series. From Plikus et. al., Science 2017
- Transcriptomes of nipple-like and ventral mouse skin fibroblasts. Bulk RNA-sequencing. GEO series. From Wu et. al., Development 2017
- Transcriptomes of whole skin from dorsal, ventral, chin and ear regions of mice at different hair cycle time points. Bulk RNA-sequencing. GEO series. From Wang, Oh et. al., eLife 2017
- Transcriptomes of epidermis and dermis from mouse and rat skin wounds. Bulk RNA-sequencing. GEO series. From Guerrero-Juarez et. al., J of Investigative Dermatology 2018
- Transcriptomes of cultured primary dermal fibroblasts/pre-adipocytes isolated from mouse skin at various ages. Bulk RNA-sequencing. GEO series. From Zhang et. al., Immunity 2019
- Single-cell RNA-sequencing of mouse skin wound cells from day 12 post-wounding. GEO series. From Guerrero-Juarez et. al., Nature Communications 2019
- Single-cell RNA-sequencing of sorted contractile cells from mouse skin wounds at day 12 post-wounding. GEO series. From Guerrero-Juarez et. al., Nature Communications 2019